Computational Resources
The compute resources within the HPC are composed of 11 heterogenous physical nodes of four different types.
CPU Nodes
|
Hardware Specification |
|
|---|---|
|
Node Type |
CPU Node |
|
Number of Nodes |
4 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node [1] |
96 |
|
Total Memory per Node |
512 GB |
|
Local Disk Storage per Node |
1.92 TB |
|
GPU Processor |
None |
[1] The system has dual processors (i.e. has 2 processors), each processor has 24 physical cores, and each core has two threads. Total CPUs = 2 x 24 x 2 = 96.
GPU Nodes
|
Hardware Specification |
|
|---|---|
|
Node Type |
GPU Node |
|
Number of Nodes |
4 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node [3] |
80 |
|
Total Memory per Node |
384 GB |
|
Local Disk Storage per Node |
1.92 TB |
|
GPU Processor |
|
|
Number of GPUs per Node |
2 |
[3] The system has dual processors (i.e. has 2 processors), each processor has 20 physical cores, and each core has two threads. Total CPUs = 2 x 20 x 2 = 80.
Mem Nodes
|
Hardware Specification |
|
|---|---|
|
Node Type |
Mem Node |
|
Number of Nodes |
2 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node [2] |
96 |
|
Total Memory per Node |
2 TB |
|
Local Disk Storage per Node |
3.84 TB |
|
GPU Processor |
None |
[2] The system has dual processors (i.e. has 2 processors), each processor has 24 physical cores, and each core has two threads. Total CPUs = 2 x 24 x 2 = 96
GPU Nodes
|
Hardware Specification |
|
|---|---|
|
Node Type |
GPU Node |
|
Number of Nodes |
4 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node [3] |
80 |
|
Total Memory per Node |
384 GB |
|
Local Disk Storage per Node |
1.92 TB |
|
GPU Processor |
|
|
Number of GPUs per Node |
2 |
[3] The system has dual processors (i.e. has 2 processors), each processor has 20 physical cores, and each core has two threads. Total CPUs = 2 x 20 x 2 = 80.
AMD Nodes
|
Hardware Specification |
|
|---|---|
|
Node Type |
AMD Node |
|
Number of Nodes |
1 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node [4] |
256 |
|
Total Memory per Node |
256 GB |
|
Local Disk Storage per Node |
960 GB |
|
GPU Processor |
|
|
Number of GPUs per Node |
8 |
[4] The system has dual processors (i.e. has 2 processors), each processor has 64 physical cores, and each core has two threads. Total CPUs = 2 x 64 x 2 = 256.
BIO Nodes
bio0[1-3]
|
Hardware Specification |
|
|---|---|
|
Node Type |
BIO Node |
|
Number of Nodes |
3 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node [6] |
128 |
|
Total Memory per Node |
128 GB |
|
Local Disk Storage per Node |
224 GB |
|
GPU Processor |
|
|
Number of GPUs per Node [7] |
8 |
[5] Note: The bio nodes belong to Dr. Michelle McCully in the Biology Department and are colocated in the WAVE HPC. Her research has priority on these nodes, though they are available for use by others.
[6] Each node has 2 processors (i.e. dual processors), each processor has 32 physical cores, and each core has two threads. Total CPUs = 2 x 32 x 2 = 128.
[7] The node contains 2 Nvidia A16 GPU boards, but an A16 is a packaging of 4 GPUs per board. Therefore the GPUs appear as if there are 8 GPUs on the server (4 per GPU board).
bio0[4-6]
|
Hardware Specification |
|
|---|---|
|
Node Type |
BIO Node |
|
Number of Nodes |
3 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node |
48 |
|
Total Memory per Node |
128 GB |
|
Local Disk Storage per Node |
894 GB |
|
GPU Processor |
|
|
Number of GPUs per Node |
2 |
Conda Nodes
dmlab01
|
Hardware Specification |
|
|---|---|
|
Node Type |
dmlab |
|
Number of Nodes |
1 |
|
Server |
Dell Poweredge R740 |
|
Processor |
|
|
Total CPUs per Node |
80 |
|
Total Memory per Node |
768 GB |
|
Local Disk Storage per Node |
894 GB |
|
GPU Processor |
|
|
Number of GPUs per Node |
2 |
dmlab02
|
Hardware Specification |
|
|---|---|
|
Node Type |
dmlab |
|
Number of Nodes |
1 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node |
128 |
|
Total Memory per Node |
1024 GB |
|
Local Disk Storage per Node |
4.4 TB |
|
GPU Processor |
|
|
Number of GPUs per Node |
8 |
dmlab03
|
Hardware Specification |
|
|---|---|
|
Node Type |
dmlab |
|
Number of Nodes |
1 |
|
Server |
|
|
Total CPUs per Node |
72 |
|
Total Memory per Node |
480 GB |
|
Total GPU Memory per Node |
96 GB |
|
Local Disk Storage per Node |
7.0 TB |
|
GPU Processor |
|
|
Number of GPUs per Node |
1 |
dmlab04
|
Hardware Specification |
|
|---|---|
|
Node Type |
dmlab |
|
Number of Nodes |
1 |
|
Server |
|
|
Total CPUs per Node |
72 |
|
Total Memory per Node |
480 GB |
|
Total GPU Memory per Node |
96 GB |
|
Local Disk Storage per Node |
7.0 TB |
|
GPU Processor |
|
|
Number of GPUs per Node |
1 |
oignat01
|
Hardware Specification |
|
|---|---|
|
Node Type |
oignat_lab |
|
Number of Nodes |
1 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node |
384 |
|
Total Memory per Node |
1536 GB |
|
Local Disk Storage per Node |
894 GB |
|
GPU Processor |
|
|
Number of GPUs per Node |
4 |
ycho201
|
Hardware Specification |
|
|---|---|
|
Node Type |
ycho_lab |
|
Number of Nodes |
1 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node |
384 |
|
Total Memory per Node |
1536 GB |
|
Local Disk Storage per Node |
894 GB |
|
GPU Processor |
N/A |
|
Number of GPUs per Node |
0 |
ycho202
|
Hardware Specification |
|
|---|---|
|
Node Type |
ycho_lab |
|
Number of Nodes |
1 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node |
384 |
|
Total Memory per Node |
1536 GB |
|
Local Disk Storage per Node |
894 GB |
|
GPU Processor |
N/A |
|
Number of GPUs per Node |
0 |
rgrotjahn0[1-2]
|
Hardware Specification |
|
|---|---|
|
Node Type |
rgrotjahn_lab |
|
Number of Nodes |
1 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node |
128 |
|
Total Memory per Node |
768 GB |
|
Local Disk Storage per Node |
8 TB |
|
GPU Processor |
N/A |
|
Number of GPUs per Node |
0 |
rgrotjahn0[3-4]
|
Hardware Specification |
|
|---|---|
|
Node Type |
rgrotjahn_lab |
|
Number of Nodes |
1 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node |
384 |
|
Total Memory per Node |
1536 GB |
|
Local Disk Storage per Node |
894 GB |
|
GPU Processor |
N/A |
|
Number of GPUs per Node |
0 |
Access Nodes
HUB Nodes
|
Hardware Specification |
|
|---|---|
|
Node Type |
Hub Node |
|
Number of Nodes |
10 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node |
1 |
|
Total Memory per Node |
30 GB |
|
Local Disk Storage per Node |
800 GB |
|
GPU Processor |
|
|
Number of GPUs per Node |
1 |
Login Nodes
|
Hardware Specification |
|
|---|---|
|
Node Type |
Login Node |
|
Number of Nodes |
3 |
|
Server |
|
|
Processor |
|
|
Total CPUs per Node |
64 |
|
Total Memory per Node |
128 GB |
|
Local Disk Storage per Node |
60 GB |
NSF Storage
|
Equipment |
Total Space |
Usable Space |
|---|---|---|
|
92 TB |
63TB |
|
|
456 TB HDD (7TB SSD cache) |
408 TB HDD (7TB SSD cache) |
Networking
|
Equipment |
Media |
Speed |
Usage |
|---|---|---|---|
|
Optical |
10-40G |
Dual Fiber Network Controllers |
|
|
IB |
100G |
Infiniband Switch |
|
|
RJ-45 Copper |
1G |
Management Switch |